Index C | E | G | I | M | N | O | P | S | T | U | W C cafa_eval() (in module cafaeval.evaluation) cafaeval.evaluation module cafaeval.graph module cafaeval.parser module compute_confusion_matrix() (in module cafaeval.evaluation) compute_confusion_matrix_exclude() (in module cafaeval.evaluation) compute_confusion_matrix_exclude_sparse() (in module cafaeval.evaluation) compute_confusion_matrix_sparse() (in module cafaeval.evaluation) compute_f() (in module cafaeval.evaluation) compute_metrics() (in module cafaeval.evaluation) compute_s() (in module cafaeval.evaluation) E evaluate_prediction() (in module cafaeval.evaluation) G Graph (class in cafaeval.graph) GroundTruth (class in cafaeval.graph) gt_exclude_parser() (in module cafaeval.parser) gt_parser() (in module cafaeval.parser) I ia_parser() (in module cafaeval.parser) M module cafaeval.evaluation cafaeval.graph cafaeval.parser N normalize() (in module cafaeval.evaluation) O obo_parser() (in module cafaeval.parser) P pred_parser() (in module cafaeval.parser) Prediction (class in cafaeval.graph) propagate() (in module cafaeval.graph) S set_ia() (cafaeval.graph.Graph method) solidify_prediction() (in module cafaeval.evaluation) T top_sort() (cafaeval.graph.Graph method) U update_toi() (in module cafaeval.parser) W write_results() (in module cafaeval.evaluation)